Luke Holman
Luke Holman
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2022
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Polygenic signals of sex differences in selection in humans from the UK Biobank
We develop new theory for studying sex-differential selection across a complete life cycle and test our models with genotypic and reproductive success data from approximately 250,000 UK Biobank individuals. We uncover polygenic signals of sex-differential selection affecting survival, reproductive success, and overall fitness.
Filip Ruzicka
,
Luke Holman
,
Tim Connallon
PDF
Code
Dataset
Project
Project
Experimental sexual selection affects the evolution of physiological and life‐history traits
We measured the effects of prolonged evolution under enforced monogamy or polyandry on the evolution of respiration, activity levels, metabolism, and resistance in the fly
Drosophila pseudoobscura
. Polyandry flies were more active, and invested more in metabolites associated with increased endurance capacity and efficient energy metabolism and regulation, namely lipids and glycogen.
Martin D. Garlovsky
,
Luke Holman
,
Andrew L. Brooks
,
Zorana K. Novicic
,
Rhonda R. Snook
PDF
Code
Project
Social immunity and chemical communication in the honeybee: immune-challenged bees enter enforced or self-imposed exile
We examined the fate of experimentally immune-challenged worker honeybees that had been reintroduced to the hive. We find that they often leave the hive, both by ‘altruistically’ leaving under their own power, and by being dragged out by other workers. Using a chemical transfer experiment, we show that the latter response is mediated by chemicals present on the body surface of immune challenged workers.
Tarli E. Conroy
,
Luke Holman
PDF
Code
Dataset
Project
Sexual selection can partly explain low frequencies of Segregation Distorter alleles
We find evidence that the mitochondrial DNA carried by
Drosophila
larvae affects the fitness of other cohabiting larvae – a mitochondrial ‘indirect genetic effect’. This result implies that the effects of mitochondrial DNA on the phenotype of males (specifically, male larvae) may have evolutionary consequences, in contrast to the received wisdom that mtDNA inside males is ‘invisible to selection’ due to maternal inheritance of mtDNA.
Thomas A Keaney
,
Therésa M Jones
,
Luke Holman
PDF
Code
Dataset
Project
Project
Male‐biased sexual selection, but not sexual dichromatism, predicts speciation in birds
We test whether variation in sexual selection can predict speciation and extinction rates across up to 5,812 species of passerine birds. Male‐biased sexual selection, and specifically sexual size dimorphism, predicted two of the three measures of speciation rates that we examined.
Justin G. Cally
,
Devi Stuart-Fox
,
Luke Holman
,
James Dale
,
Iliana Medina
PDF
Code
Dataset
Project
Resistance to natural and synthetic gene drive systems
This review summarizes our current understanding of the evolution of resistance to naturally-occurring and synthetically-created gene …
T.A.R. Price
,
N. Windbichler
,
R.L. Unckless
,
A. Sutter
,
J-N Runge
,
P.R. Ross
,
A. Pomiankowski
,
N.L. Nuckolls
,
C. Montchamp-Moreau
,
N. Mideo
,
O.Y. Martin
,
A. Manser
,
M. Legros
,
A.M. Laraccuente
,
L. Holman
,
J. Godwin
,
N. Gemmell
,
C. Courret
,
A. Buchman
,
L.G. Barrett
,
A.K. Lindholm
PDF
Project
Project
Sibling rivalry versus mother's curse: can kin competition facilitate a response to selection on male mitochondria?
We find evidence that the mitochondrial DNA carried by
Drosophila
larvae affects the fitness of other cohabiting larvae – a mitochondrial ‘indirect genetic effect’. This result implies that the effects of mitochondrial DNA on the phenotype of males (specifically, male larvae) may have evolutionary consequences, in contrast to the received wisdom that mtDNA inside males is ‘invisible to selection’ due to maternal inheritance of mtDNA.
Thomas A Keaney
,
Heidi W S Wong
,
Damian K Dowling
,
Therésa M Jones
,
Luke Holman
PDF
Code
Dataset
Project
Project
An X-linked meiotic drive allele has strong, recessive fitness costs in female Drosophila pseudoobscura
We measured the effects of a natural gene drive,
Sex Ratio
(
SR
), on fitness in
Drosophila pseudoobscura
. We find that
SD
is very costly, especially when homozygous, and that it also has transgenerational effects on offspring fitness and sex ratio. Using a model, we show that these effects may explain the frequency and clinal patterns of
SR
in nature.
W. Larner
,
T.A.R. Price
,
Luke Holman
,
Nina Wedell
PDF
Code
Project
Project
Mother’s curse and indirect genetic effects: do males matter to mitochondrial genome evolution?
We argue that the effects of mitochondrial DNA on a male phenotype can respond to selection, provided that males interact with their female ‘mitochondrial relatives’, and that the male phenotype affects female fitness. We present experimental evidence that female fitness depends on the mitochondrial DNA carried by interacting males, and discuss the implications for ‘mother’s curse’.
Thomas A Keaney
,
Heidi W S Wong
,
Damian K Dowling
,
Therésa M Jones
,
Luke Holman
PDF
Code
Project
Project
Fitness consequences of the selfish supergene Segregation Distorter
We measured the effects of a natural gene drive,
Segregation Distorter
(
SD
), on fitness in
Drosophila melanogaster
. We find that
SD
is very costly, especially when homozygous, and that it also has transgenerational effects on offspring fitness and sex ratio. Using a model, we show that these effects may explain the puzzling rarity of
SD
in nature.
Heidi W S Wong
,
Luke Holman
PDF
Code
Project
Project
Evolutionary simulations of Z-linked suppression gene drives
This paper presents eco-evo simulations investigating the feasibility of a newly-proposed type of gene drive, the
W
-shredder.
W
-shredders might someday be used to control populations of pests and pathogens that have
ZW
sex determination, such as Lepidopteran pests, parasitic trematodes, and cane toads.
Luke Holman
PDF
Code
Project
Researchers collaborate with same-gendered colleagues more often than expected across the life sciences
We find that researchers tend to co-publish with same-gendered colleagues, and that this tendency is presently increasing. We found no evidence that senior academics drive this pattern, or that the pattern is stronger in fields where women are in the minority. Interestingly, journals with a high impact factor for their discipline tended to have comparatively many mixed-gender teams.
Luke Holman
,
Claire Morandin
PDF
Code
Project
Project
Comparative transcriptomics of social insect queen pheromones
Many ants, bees, and wasps use similar or identical chemicals as queen pheromones, even though these taxa diverged >150MYA, and evolved eusociality independently. Here, we use mRNA sequencing to identify queen pheromone-sensitive genes in 4 ant and bee species, and show that pheromones affect many of the same transcriptional modules. Pheromone-sensitive genes tend to be ancient, positively selected, peripheral in transcriptomic networks, hypomethylated, and caste-specific in their expression.
Luke Holman
,
Heikki Helanterä
,
Kalevi Trontti
,
Alexander S. Mikheyev
PDF
Code
Project
Project
Sexual selection improves population fitness: a systematic review and meta-analysis
We synthesised 459 effect sizes from 65 pertinent experimental evolution studies using meta-analysis, and found that sexual selection on males tends to elevate the mean and reduce the variance for many fitness traits. The beneficial effect was stronger in female traits than males, and for populations evolving under stressful conditions. The results have implications for conservation and captive breeding programs.
Justin G. Cally
,
Devi Stuart-Fox
,
Luke Holman
PDF
Code
Dataset
Project
Project
Project
The gender gap in science: how long until women are equally represented?
We recorded the gender of 36 million authors from >100 countries publishing in >6000 journals from most STEMM, and made a
web app
facilitating exploration of the data. Despite recent progress, the gender gap appears likely to persist for generations.
Luke Holman
,
Devi Stuart-Fox
,
Cindy E. Hauser
PDF
Code
Dataset
Project
Project
Evolution of female choice under intralocus sexual conflict and genotype-by-environment interactions
We use theoretical models to examine the evolution of female choice when there is both intralocus sexual conflict and local adaptation. We show that IASC can weaken female preferences for high-condition males – or even cause a preference for males in low condition – depending on the relative benefits of producing well-adapted sons versus daughters. We discuss the relevance of our results to conservation genetics and empirical evolutionary biology.
Xiang-Yi Li
,
Luke Holman
Preprint
PDF
Code
Onwards and upwards: a response to comments on Holman
Luke Holman
PDF
Project
Queen pheromones and reproductive division of labor: a meta-analysis
Our understanding of chemical communication between social insect queens and workers has advanced rapidly in recent years. Several …
Luke Holman
PDF
Code
Dataset
Building a new research framework for social evolution: Intralocus caste antagonism
The breeding and non-breeding ‘castes’ of eusocial insects provide a striking example of role-specific selection, where each caste …
Tanya M. Pennell
,
Luke Holman
,
Edward H. Morrow
,
Jeremy Field
PDF
Project
The effects of stress and sex on selection, genetic covariance, and the evolutionary response
The capacity of a population to adapt to selection (evolvability) depends on whether the structure of genetic variation permits the …
Luke Holman
,
Frances Jacomb
PDF
Project
Conserved queen pheromones in bumblebees: A reply to Amsalem et al
In a recent study, Amsalem, Orlova & Grozinger (2015) performed experiments with Bombus impatiens bumblebees to test the hypothesis …
Luke Holman
,
Jelle S. van Zweden
,
Ricardo C Oliveira
,
Annette Van Oystaeyen
,
Tom Wenseleers
PDF
Project
Project
Sexual selection expedites the evolution of pesticide resistance
Using experimental evolution, we test whether allowing or preventing sexual selection on males affects the rate at which flour beetle populations evolve resistance (and susceptibility) to insecticide.
Frances Jacomb
,
Jason Marsh
,
Luke Holman
PDF
Project
Ornament complexity is correlated with sexual selection: a comment on Raia et al
Raia et al. propose that the evolution of the shape and complexity of animal ornaments (e.g., deer antlers) can be explained by …
Luke Holman
,
Jakob Bro-Jørgensen
PDF
Project
Evolution of social insect polyphenism facilitated by the sex differentiation cascade
The major transition to eusociality required the evolution of a switch to canalize development into either a reproductive or a helper, …
Antonia Klein
,
Eva Schultner
,
Helena Lowak
,
Lukas Schrader
,
Jürgen Heinze
,
Luke Holman
,
Jan Oettler
PDF
Project
Highly specific responses to queen pheromone in three Lasius ant species
Queen pheromones mediate the reproductive division of labor in social insect colonies and provide novel opportunities for investigating …
Luke Holman
,
Brian Hanley
,
Jocelyn Millar
PDF
Project
Queen pheromones modulate DNA methyltransferase activity in bee and ant workers
DNA methylation is emerging as an important regulator of polyphenism in the social insects. Research has concentrated on differences in …
Luke Holman
,
Kalevi Trontti
,
Heikki Helanterä
PDF
Project
Project
The ecology and evolutionary dynamics of meiotic drive
Both naturally occurring and synthetic ‘meiotic drivers’ violate Mendel’s law of equal segregation and can rapidly spread through …
A.K. Lindholm
,
K.A. Dyer
,
R.C. Firman
,
L. Fishman
,
W. Forstmeier
,
L. Holman
,
H. Johannesson
,
U. Knief
,
H. Kokko
,
A.M. Laraccuente
,
A. Manser
,
C. Montchamp-Moreau
,
V.G. Petrosyan
,
A. Pomiankowski
,
D.C. Presgraves
,
L.D. Safronova
,
A. Sutter
,
R.L. Unckless
,
R. Verspoor
,
N. Wedell
,
G.S. Wilkinson
,
T.A.R. Price
PDF
Project
Project
Bet hedging via multiple mating: a meta-analysis
Polyandry has been hypothesized to allow females to “bet hedge” against mating only with unsuitable mates, reducing variance in …
Luke Holman
PDF
Code
Dataset
Project
Evidence of experimental bias in the life sciences: why we need blind data recording
Observer bias and other “experimenter effects” occur when researchers’ expectations influence study outcome. These biases are strongest …
Luke Holman
,
Megan L. Head
,
Robert Lanfear
,
Michael D. Jennions
PDF
Code
Dataset
Project
Bet-hedging via polyandry: A comment on 'Mating portfolios: bet-hedging, sexual selection and female multiple mating'
Garcia-Gonzalez et al. [1] conducted an original and elegant experiment examining whether fertilization of a female’s eggs by …
Jonathan M. Henshaw
,
Luke Holman
PDF
Project
Assessing the alignment of sexual and natural selection using radio-mutagenized seed beetles
A major unsolved question in evolutionary biology concerns the relationship between natural and sexual selection. Sexual selection …
Daniel J. Power
,
Luke Holman
PDF
Dataset
Project
The extent and consequences of p-hacking in science
A focus on novel, confirmatory, and statistically significant results leads to substantial bias in the scientific literature. One type …
Megan L. Head
,
Luke Holman
,
Robert Lanfear
,
Andrew T. Kahn
,
Michael D. Jennions
PDF
Code
Dataset
Project
Coevolutionary dynamics of polyandry and sex-linked meiotic drive
Segregation distorters located on sex chromosomes are predicted to sweep to fixation and cause extinction via a shortage of one sex, …
Luke Holman
,
Thomas A.R. Price
,
Nina Wedell
,
Hanna Kokko
PDF
Code
Project
Project
The evolution of queen pheromones in the ant genus Lasius
Queen pheromones are among the most important chemical messages regulating insect societies yet they remain largely undiscovered, …
Luke Holman
,
Robert Lanfear
,
Patrizia d'Ettorre
PDF
Project
Project
Female preferences for timing in a fiddler crab with synchronous courtship waving displays
Studies of sexual communication typically focus on the design and information content of a signal of interest, but the timing of signal …
Andrew T. Kahn
,
Luke Holman
,
Patricia R.Y. Backwell
PDF
Dataset
Project
Even more functions of sperm RNA: a response to Hosken and Hodgson
As recently outlined in TREE [1], many animals and plants are thought to load their male gametes with multiple types of RNA, some of …
Luke Holman
,
Thomas A.R. Price
PDF
Project
Project
Project
Bumblebee size polymorphism and worker response to queen pheromone
Queen pheromones are chemical signals produced by reproductive individuals in social insect colonies. In many species they are key to …
Luke Holman
PDF
Project
Project
Cuticular lipids correlate with age and insemination status in queen honeybees
Eusocial insects exhibit reproductive division of labour, in which one or a few queens perform almost all of the reproduction, while …
Maja Babis
,
Luke Holman
,
Ricarda Fenske
,
Melissa L. Thomas
,
Boris Baer
PDF
Project
Project
Local adaptation and the evolution of female choice
This book chapter presents a theoretical model looking at the evolution of female choice when male condition is determined by …
Luke Holman
,
Hanna Kokko
PDF
Project
Conditional helping and evolutionary transitions to eusociality and cooperative breeding
The nonreproductive helpers of many arthropod, bird and mammal species are a perennial puzzle for evolutionary biologists. Theory and …
Luke Holman
PDF
Project
Project
Polyandrous females found fitter populations
Multiple mating by females (polyandry) requires an evolutionary explanation, because it carries fitness costs in many species. When …
Daniel J. Power
,
Luke Holman
PDF
Project
The evolution of genomic imprinting: Costs, benefits and long-term consequences
Genomic imprinting refers to a pattern of gene expression in which a specific parent’s allele is either under-expressed or …
Luke Holman
,
Hanna Kokko
PDF
Fiddlers on the roof: elevation muddles mate choice in fiddler crabs
Biological signaling usually occurs in complex environments, yet signals are most often studied in controlled experiments that strip …
Luke Holman
,
Andrew T. Kahn
,
Patricia R.Y. Backwell
PDF
Project
Conserved class of queen pheromones stops social insect workers from reproducing
A major evolutionary transition to eusociality with reproductive division of labor between queens and workers has arisen independently …
Annette Van Oystaeyen
,
Ricardo C. Oliveira
,
Luke Holman
,
Jelle S. van Zweden
,
Carmen Romero
,
Cintia A. Oi
,
Patrizia d'Ettorre
,
Mohammadreza Khalesi
,
Johan Billen
,
Felix Wäckers
,
Jocelyn G. Millar
,
Tom Wenseleers
PDF
Dataset
Project
Project
Caste load and the evolution of reproductive skew
Reproductive skew theory seeks to explain how reproduction is divided among group members in animal societies. Existing theory is …
Luke Holman
PDF
Project
Project
Crozier’s paradox revisited: maintenance of genetic recognition systems by disassortative mating
Organisms are predicted to behave more favourably towards relatives, and kin-biased cooperation has been found in all domains of life …
Luke Holman
,
Jelle S. van Zweden
,
Timothy A. Linksvayer
,
Patrizia d'Ettorre
PDF
Project
Genetic constraints on dishonesty and caste dimorphism in an ant
The ultimate causes of honest signaling remain a subject of debate, with questions remaining over the relative importance of costs and …
Luke Holman
,
Timothy A. Linksvayer
,
Patrizia d'Ettorre
PDF
Dataset
Project
Project
Project
The consequences of polyandry for population viability, extinction risk and conservation
Polyandry, by elevating sexual conflict and selecting for reduced male care relative to monandry, may exacerbate the cost of sex and …
Luke Holman
,
Hanna Kokko
PDF
Project
Project
Cuticular chemistry of males and females in the ant Formica fusca
Communication between organisms involves visual, auditory, and olfactory pathways. In solitary insects, chemical recognition cues are …
Anton Chernenko
,
Luke Holman
,
Heikki Helanterä
,
Liselotta Sundström
PDF
Project
Project
Are queen ants inhibited by their own pheromone? Regulation of productivity via negative feedback
Social organisms have evolved diverse and complex regulatory mechanisms that allow them to coordinate group-level functions. Signals …
Luke Holman
,
Chloe Leroy
,
Charlotte G. Jørgensen
,
John Nielsen
,
Patrizia d'Ettorre
PDF
Project
Project
Costs and constraints conspire to produce honest signaling: insights from an ant queen pheromone
Signal costs and evolutionary constraints have both been proposed as ultimate explanations for the ubiquity of honest signaling, but …
Luke Holman
PDF
Project
Project
Project
Random sperm use and genetic effects on worker caste fate in Atta colombica leaf‐cutting ants
Sperm competition can produce fascinating adaptations with far‐reaching evolutionary consequences. Social taxa make particularly …
Luke Holman
,
Marlene Stürup
,
Kalevi Trontti
,
Jacobus J. Boomsma
PDF
Project
Project
Project
Terminal investment in multiple sexual signals: immune‐challenged males produce more attractive pheromones
Trade‐offs between current and future resource allocation can select for elevated reproductive effort in individuals facing mortality. …
Matthias Lange Nielsen
,
Luke Holman
PDF
Project
Wax on, wax off: Nest soil facilitates indirect transfer of recognition cues between ant nestmates
Social animals use recognition cues to discriminate between group members and non-members. These recognition cues may be conceptualized …
Nick Bos
,
Lena Grinsted
,
Luke Holman
PDF
Project
Eusociality evolved in full sib families only
The paper by Nowak et al. has the evolution of eusociality as its title, but it is mostly about something else. It argues against …
Jacobus J. Boomsma
,
Madeleine Beekman
,
Charles K. Cornwallis
,
Ashleigh S. Griffin
,
Luke Holman
,
William O.H. Hughes
,
Laurent Keller
,
Benjamin Oldroyd
,
Francis L.W. Ratnieks
PDF
Project
Queen pheromones: The chemical crown governing insect social life
Group-living species produce signals that alter the behavior and even the physiology of their social partners. Social insects possess …
Luke Holman
PDF
Project
Project
Identification of an ant queen pheromone regulating worker sterility
The selective forces that shape and maintain eusocial societies are an enduring puzzle in evolutionary biology. Ordinarily sterile …
Luke Holman
,
Charlotte G. Jørgensen
,
John Nielsen
,
Patrizia d'Ettorre
PDF
Project
Project
Selfish strategies and honest signalling: reproductive conflicts in ant queen associations
Social insects offer unique opportunities to test predictions regarding the evolution of cooperation, life histories and communication. …
Luke Holman
,
Stephanie Dreier
,
Patrizia d'Ettorre
PDF
Project
Project
Sperm viability staining in ecology and evolution: potential pitfalls
The causes and consequences of variation in sperm quality, survival and ageing are active areas of research in ecology and evolution. …
Luke Holman
PDF
Project
Project
Drosophila melanogaster seminal fluid can protect the sperm of other males
Many internally‐fertilizing animals produce seminal fluid which is transferred along with sperm during mating. Seminal fluid typically …
Luke Holman
PDF
Project
Project
A sterile sperm caste protects brother fertile sperm from female-mediated death in Drosophila pseudoobscura
Spermicide (i.e., female-mediated sperm death) is an understudied but potentially widespread phenomenon that has important …
Luke Holman
,
Rhonda R. Snook
PDF
Project
Project
What use is an infertile sperm? A comparative test of parasperm function in sperm-heteromorphic Drosophila
Sperm size and number are important determinants of male reproductive success. The genus
Drosophila
exhibits a remarkable diversity of …
Luke Holman
,
Robert P. Freckleton
,
Rhonda R. Snook
PDF
Project
Project
Spermicide, cryptic female choice and the evolution of sperm form and function
Sperm competition and cryptic female choice profoundly affect sperm morphology, producing diversity within both species and …
Luke Holman
,
Rhonda R. Snook
PDF
Project
Project
Modulation of sexual signalling by immune challenged male mealworm beetles (Tenebrio molitor, L.): evidence for terminal investment and dishonesty
Organisms partition resources into life-history traits in order to maximise fitness over their expected lifespan. For the males of many …
Benjamin Sadd
,
Luke Holman
,
Helen Armitage
,
Fiona Lock
,
Rachel Marland
,
Michael T. Siva-Jothy
PDF
Project
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